STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DD238_004794ACT-like domain-containing protein. (167 aa)    
Predicted Functional Partners:
DD238_002419
PALP domain-containing protein.
 
   
 0.983
DD238_003314
PALP domain-containing protein.
 
   
  0.981
DD238_004793
PALP domain-containing protein.
 
     0.936
DD238_000963
Uncharacterized protein.
  
 
 0.928
DD237_008093
PALP domain-containing protein.
  
 0.925
DD237_000289
Uncharacterized protein; Belongs to the TrpA family.
  
 0.925
DD237_007249
Uncharacterized protein.
  
 0.924
DD237_000153
Acetolactate synthase.
  
 0.915
DD238_008228
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.910
DD238_001898
Aminotran_5 domain-containing protein.
  
 0.863
Your Current Organism:
Peronospora effusa
NCBI taxonomy Id: 542832
Other names: P. effusa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.