STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DD237_005974CN hydrolase domain-containing protein. (271 aa)    
Predicted Functional Partners:
DD238_007556
Uncharacterized protein.
     
 0.798
DD237_002208
Uncharacterized protein.
     
 0.798
DD237_005602
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
  
 
 0.749
DD237_003069
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family.
  
 
 0.718
DD238_005485
Uncharacterized protein.
  
 
 0.705
DD238_005484
Uncharacterized protein.
  
 
 0.705
DD237_002000
Arginase; Belongs to the arginase family.
  
 0.700
DD238_008228
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.698
DD237_006542
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.693
DD237_007392
Glutamine synthetase.
    
 0.678
Your Current Organism:
Peronospora effusa
NCBI taxonomy Id: 542832
Other names: P. effusa
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