STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DD238_007049WAPL domain-containing protein. (1010 aa)    
Predicted Functional Partners:
DD238_003765
Uncharacterized protein.
   
 0.944
DD237_005297
Uncharacterized protein.
   
 0.944
DD238_002845
Structural maintenance of chromosomes protein.
    
 0.943
DD238_008081
Structural maintenance of chromosomes protein.
    
 0.920
DD238_004797
SCD domain-containing protein.
   
 0.917
DD238_002916
Uncharacterized protein.
   
    0.854
DD237_005533
HECT domain-containing protein.
   
    0.854
DD237_006808
SMC_N domain-containing protein.
   
 0.774
DD238_000095
Uncharacterized protein.
    
 0.757
DD238_000094
AAA_23 domain-containing protein.
    
 0.757
Your Current Organism:
Peronospora effusa
NCBI taxonomy Id: 542832
Other names: P. effusa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.