STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DD237_006018Uncharacterized protein. (69 aa)    
Predicted Functional Partners:
DD238_007766
Uncharacterized protein.
    
 0.966
DD237_008228
Longin domain-containing protein; Belongs to the synaptobrevin family.
   
 0.955
DD238_000803
Uncharacterized protein.
    
 0.950
DD238_005601
Uncharacterized protein.
    
 0.943
DD238_003155
Uncharacterized protein.
    
 0.940
DD237_000128
TPR_REGION domain-containing protein.
    
 0.881
DD238_007052
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.861
DD237_005949
Protein kinase domain-containing protein.
    
 0.823
DD237_005784
Protein kinase domain-containing protein.
    
 0.823
DD238_003017
Uncharacterized protein.
    
 0.823
Your Current Organism:
Peronospora effusa
NCBI taxonomy Id: 542832
Other names: P. effusa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.