STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DD237_000178SPRY domain-containing protein. (412 aa)    
Predicted Functional Partners:
DD238_004370
WD_REPEATS_REGION domain-containing protein.
   
 
 0.861
DD238_001700
Uncharacterized protein.
   
 
 0.815
DD237_005837
CTLH domain-containing protein.
   
 
 0.778
DD237_005038
CTLH domain-containing protein.
    
 
 0.771
DD238_006612
Uncharacterized protein.
    
 
 0.771
DD237_002162
Yippee domain-containing protein.
   
 
 0.722
DD237_007399
Uncharacterized protein.
    
   0.627
DD238_005293
Uncharacterized protein.
    
   0.627
DD237_004721
FBPase domain-containing protein; Belongs to the FBPase class 1 family.
    
 
 0.596
DD238_007232
Uncharacterized protein.
    
 0.538
Your Current Organism:
Peronospora effusa
NCBI taxonomy Id: 542832
Other names: P. effusa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.