STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DD237_005884Uncharacterized protein. (280 aa)    
Predicted Functional Partners:
DD237_008147
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.984
DD237_002601
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.967
DD238_003264
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
    
 0.966
DD238_001185
Uncharacterized protein.
    
 0.914
DD238_001184
Uncharacterized protein.
    
 0.914
DD238_001312
SRP54 domain-containing protein.
   
 
 0.841
DD237_007013
Uncharacterized protein.
   
 
 0.817
DD238_000128
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 0.801
DD238_007110
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.793
DD237_007974
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
  0.784
Your Current Organism:
Peronospora effusa
NCBI taxonomy Id: 542832
Other names: P. effusa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.