STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DD237_001548Uncharacterized protein. (335 aa)    
Predicted Functional Partners:
DD238_005161
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 0.933
DD238_000938
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.915
DD237_005604
Uncharacterized protein.
   
 
 0.762
DD238_007299
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
  
 0.606
DD238_000798
Uncharacterized protein.
   
    0.551
DD237_006542
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
  
 0.510
DD237_004306
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
  
 0.510
DD238_000569
HEM4 domain-containing protein.
     
 0.469
DD237_006364
Uncharacterized protein; Belongs to the ferrochelatase family.
     
 0.469
DD237_005203
Uncharacterized protein.
   
 
 0.468
Your Current Organism:
Peronospora effusa
NCBI taxonomy Id: 542832
Other names: P. effusa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.