STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DD237_003564Uncharacterized protein. (490 aa)    
Predicted Functional Partners:
DD238_006861
RRM domain-containing protein.
  
 
 0.853
DD238_000530
Uncharacterized protein.
    
 0.809
DD237_003450
Uncharacterized protein.
    
0.808
DD237_008147
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.807
DD237_002771
Nuclear cap-binding protein subunit 2.
  
 
 0.796
DD237_006047
Uncharacterized protein.
    
 0.782
DD237_003315
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.773
DD238_000023
Uncharacterized protein.
  
 
 0.773
DD238_005797
Sm domain-containing protein.
    
 0.764
DD237_004984
Small nuclear ribonucleoprotein Sm D3.
   
 0.758
Your Current Organism:
Peronospora effusa
NCBI taxonomy Id: 542832
Other names: P. effusa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.