STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DD237_001928WD_REPEATS_REGION domain-containing protein. (479 aa)    
Predicted Functional Partners:
DD238_001243
Uncharacterized protein.
   
 0.999
DD238_002768
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
DD237_000380
Nop domain-containing protein.
   
 0.999
DD238_004405
Nop domain-containing protein.
   
 0.999
DD238_006451
WD_REPEATS_REGION domain-containing protein.
  
 0.998
DD237_003434
WD_REPEATS_REGION domain-containing protein.
  
 0.998
DD238_001100
WD_REPEATS_REGION domain-containing protein.
  
0.998
DD237_006939
Uncharacterized protein.
   
 
0.997
DD237_004075
WD_REPEATS_REGION domain-containing protein.
   
 0.997
DD238_005997
Uncharacterized protein.
   
 
 0.997
Your Current Organism:
Peronospora effusa
NCBI taxonomy Id: 542832
Other names: P. effusa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.