STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ58509.1Two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX. (367 aa)    
Predicted Functional Partners:
SEQ58536.1
Two-component system, NarL family, nitrate/nitrite response regulator NarL.
 0.974
SER01345.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 0.887
SER22457.1
Two component transcriptional regulator, LuxR family.
 0.880
SER01838.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 0.878
SER31780.1
Two-component system, NarL family, captular synthesis response regulator RcsB.
 
 0.877
SER05465.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.873
SER02478.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.867
SER01317.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  
  0.862
SEQ58568.1
PAS domain S-box-containing protein.
  
 
  0.856
SEP96872.1
PAS domain S-box-containing protein.
  
 
 0.855
Your Current Organism:
Pseudomonas cuatrocienegasensis
NCBI taxonomy Id: 543360
Other names: CIP 109853, LMG 24676, LMG:24676, P. cuatrocienegasensis, Pseudomonas cuatrocienegasensis Escalante et al. 2009, Pseudomonas sp. 1N, Pseudomonas sp. 3N, strain 1N
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