TSAR_005124 protein (Trichomalopsis sarcophagae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

TSAR_005124

Uncharacterized protein. (67 aa)

Predicted Functional Partners:

TSAR_001480

0.533

TSAR_003073

0.486

TSAR_004024

0.471

TSAR_011172

0.470

TSAR_003331

0.470

TSAR_001552

0.468

TSAR_014419

0.467

TSAR_014588

0.467

TSAR_013568

0.467

TSAR_004698

0.466

Your Current Organism:

Trichomalopsis sarcophagae

NCBI taxonomy Id: 543379
Other names: T. sarcophagae

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TSAR_001480	TSAR_001552	A0A232F2H4	A0A232ELE6	Uncharacterized protein.	Uncharacterized protein.	0.872
TSAR_001480	TSAR_005124	A0A232F2H4	A0A232EEE4	Uncharacterized protein.	Uncharacterized protein.	0.533
TSAR_001480	TSAR_011172	A0A232F2H4	A0A232EI29	Uncharacterized protein.	Nucleoside diphosphate kinase.	0.840
TSAR_001552	TSAR_001480	A0A232ELE6	A0A232F2H4	Uncharacterized protein.	Uncharacterized protein.	0.872
TSAR_001552	TSAR_003331	A0A232ELE6	A0A232EZ09	Uncharacterized protein.	Uncharacterized protein.	0.989
TSAR_001552	TSAR_004024	A0A232ELE6	A0A232EIX3	Uncharacterized protein.	Uncharacterized protein.	0.989
TSAR_001552	TSAR_004698	A0A232ELE6	A0A232EPC3	Uncharacterized protein.	Uncharacterized protein.	0.939
TSAR_001552	TSAR_005124	A0A232ELE6	A0A232EEE4	Uncharacterized protein.	Uncharacterized protein.	0.468
TSAR_001552	TSAR_011172	A0A232ELE6	A0A232EI29	Uncharacterized protein.	Nucleoside diphosphate kinase.	0.727
TSAR_001552	TSAR_014588	A0A232ELE6	A0A232EZF9	Uncharacterized protein.	Uncharacterized protein.	0.990
TSAR_003073	TSAR_005124	A0A232FFV6	A0A232EEE4	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	Uncharacterized protein.	0.486
TSAR_003073	TSAR_011172	A0A232FFV6	A0A232EI29	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	Nucleoside diphosphate kinase.	0.636
TSAR_003073	TSAR_014588	A0A232FFV6	A0A232EZF9	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	Uncharacterized protein.	0.836
TSAR_003331	TSAR_001552	A0A232EZ09	A0A232ELE6	Uncharacterized protein.	Uncharacterized protein.	0.989
TSAR_003331	TSAR_004024	A0A232EZ09	A0A232EIX3	Uncharacterized protein.	Uncharacterized protein.	0.999
TSAR_003331	TSAR_004698	A0A232EZ09	A0A232EPC3	Uncharacterized protein.	Uncharacterized protein.	0.991
TSAR_003331	TSAR_005124	A0A232EZ09	A0A232EEE4	Uncharacterized protein.	Uncharacterized protein.	0.470
TSAR_003331	TSAR_011172	A0A232EZ09	A0A232EI29	Uncharacterized protein.	Nucleoside diphosphate kinase.	0.853
TSAR_003331	TSAR_014588	A0A232EZ09	A0A232EZF9	Uncharacterized protein.	Uncharacterized protein.	0.999
TSAR_004024	TSAR_001552	A0A232EIX3	A0A232ELE6	Uncharacterized protein.	Uncharacterized protein.	0.989