STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSAR_009403Uncharacterized protein. (553 aa)    
Predicted Functional Partners:
TSAR_014820
Ribosomal_L18_c domain-containing protein.
    
 
 0.669
TSAR_013426
Brix domain-containing protein.
   
 
 0.650
TSAR_005206
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.624
TSAR_012913
Uncharacterized protein.
    
 
 0.605
TSAR_001478
Brix domain-containing protein.
   
    0.517
TSAR_016827
WD_REPEATS_REGION domain-containing protein.
   
  
 0.484
TSAR_002277
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 0.474
TSAR_016167
PUM-HD domain-containing protein.
   
  
 0.438
TSAR_010240
Uncharacterized protein.
   
    0.416
TSAR_004435
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
  
 0.403
Your Current Organism:
Trichomalopsis sarcophagae
NCBI taxonomy Id: 543379
Other names: T. sarcophagae
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