Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSAR_002078HMG box domain-containing protein. (474 aa)    
Predicted Functional Partners:
TSAR_003860
Uncharacterized protein.
    
   0.861
TSAR_005777
SANT domain-containing protein.
    
 
 0.803
TSAR_002017
ZP domain-containing protein.
    
   0.803
TSAR_004313
RRM domain-containing protein.
    
   0.802
TSAR_002067
WD_REPEATS_REGION domain-containing protein.
    
   0.653
TSAR_014031
Fumarylacetoacetase.
    
   0.616
TSAR_013884
Uncharacterized protein.
    
   0.603
TSAR_011749
Uncharacterized protein.
   
 0.590
TSAR_010897
Uridine kinase; Belongs to the uridine kinase family.
   
 0.586
TSAR_006077
PRK domain-containing protein.
   
 0.586
Your Current Organism:
Trichomalopsis sarcophagae
NCBI taxonomy Id: 543379
Other names: T. sarcophagae
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