STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSAR_009436Uncharacterized protein. (177 aa)    
Predicted Functional Partners:
TSAR_012614
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.933
TSAR_005040
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.910
TSAR_006005
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.891
TSAR_016033
MIF4G domain-containing protein.
   
 0.858
TSAR_003340
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.837
TSAR_000544
RRM domain-containing protein.
   
 0.824
TSAR_012611
RRM domain-containing protein.
   
 0.824
TSAR_009296
RRM domain-containing protein.
   
 0.798
TSAR_001430
RRM domain-containing protein.
   
 0.794
TSAR_013103
S1 motif domain-containing protein.
   
 0.793
Your Current Organism:
Trichomalopsis sarcophagae
NCBI taxonomy Id: 543379
Other names: T. sarcophagae
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