STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSAR_005180RNA helicase. (961 aa)    
Predicted Functional Partners:
TSAR_010240
Uncharacterized protein.
   
 
 0.969
TSAR_002784
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
0.969
TSAR_003263
Uncharacterized protein.
  
 0.968
TSAR_006576
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 0.967
TSAR_014713
WD_REPEATS_REGION domain-containing protein.
   
 0.956
TSAR_014005
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.954
TSAR_016601
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.950
TSAR_015178
Uncharacterized protein.
   
 0.950
TSAR_001342
Uncharacterized protein.
   
 0.948
TSAR_009625
Uncharacterized protein.
   
 
 0.948
Your Current Organism:
Trichomalopsis sarcophagae
NCBI taxonomy Id: 543379
Other names: T. sarcophagae
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