STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSAR_013776PBPe domain-containing protein. (58 aa)    
Predicted Functional Partners:
TSAR_016648
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.890
TSAR_003767
Protein kinase domain-containing protein.
   
 0.721
TSAR_013639
Uncharacterized protein.
   
 0.718
TSAR_001941
Uncharacterized protein.
   
 0.682
TSAR_008231
SH3 domain-containing protein.
   
 0.682
TSAR_008226
Guanylate kinase-like domain-containing protein.
   
 0.682
TSAR_008219
PDZ domain-containing protein.
   
 0.682
TSAR_008232
PDZ domain-containing protein.
   
 0.682
TSAR_005130
Guanylate kinase-like domain-containing protein.
   
 0.674
TSAR_008281
Uncharacterized protein.
   
 0.674
Your Current Organism:
Trichomalopsis sarcophagae
NCBI taxonomy Id: 543379
Other names: T. sarcophagae
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