STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Htur_2966PFAM: Protein of unknown function DUF2182, transmembrane, metal-binding; KEGG: bcm:Bcenmc03_5847 metal-binding integral membrane protein-like protein. (263 aa)    
Predicted Functional Partners:
Htur_2965
PFAM: protein of unknown function DUF1326; KEGG: mlo:mll4476 hypothetical protein.
 
     0.924
Htur_2967
Hypothetical protein.
       0.506
Htur_3647
PFAM: selenium-binding protein; KEGG: similar to Selenium binding protein 1.
  
     0.475
Your Current Organism:
Haloterrigena turkmenica
NCBI taxonomy Id: 543526
Other names: H. turkmenica DSM 5511, Haloterrigena turkmenica ATCC 51198, Haloterrigena turkmenica DSM 5511, Haloterrigena turkmenica str. DSM 5511, Haloterrigena turkmenica strain DSM 5511
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.