STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Htur_3104TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: pfo:Pfl01_1457 agmatinase; Belongs to the arginase family. (282 aa)    
Predicted Functional Partners:
Htur_3361
PFAM: Pyruvoyl-dependent arginine decarboxylase; KEGG: scl:sce4569 hypothetical protein.
    
 0.918
eif5a
Translation initiation factor eIF-5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
  
  
 0.863
Htur_2266
Arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: gem:GM21_2324 arginase; Belongs to the arginase family.
  
     0.605
Htur_0325
PFAM: aminotransferase class-III; KEGG: hha:Hhal_0727 acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.603
Htur_3004
PFAM: Spermine synthase; KEGG: sfu:Sfum_1332 spermine synthase.
  
  
 0.536
Htur_3105
PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit III; KEGG: bac:BamMC406_6287 cytochrome c oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.522
Htur_3102
Hypothetical protein.
       0.488
Htur_3101
PFAM: ABC-1 domain protein; KEGG: ATATH13 (ABC2 homolog 13).
       0.477
Htur_1730
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ank:AnaeK_3641 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
  
 0.471
Htur_0323
KEGG: gem:GM21_3742 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
 
 0.431
Your Current Organism:
Haloterrigena turkmenica
NCBI taxonomy Id: 543526
Other names: H. turkmenica DSM 5511, Haloterrigena turkmenica ATCC 51198, Haloterrigena turkmenica DSM 5511, Haloterrigena turkmenica str. DSM 5511, Haloterrigena turkmenica strain DSM 5511
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.