Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Htur_3203PFAM: NUDIX hydrolase; KEGG: dat:HRM2_01950 MutT family protein, putative 78-dihydro-8-oxoguanine triphosphatase (8-oxo-dGTPase). (182 aa)    
Predicted Functional Partners:
flpA
Fibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family.
  
 0.613
Htur_3204
PFAM: protein of unknown function DUF6 transmembrane; KEGG: pfo:Pfl01_5645 hypothetical protein.
       0.525
Htur_3205
PFAM: protein of unknown function DUF6 transmembrane; KEGG: pap:PSPA7_6234 hypothetical protein.
       0.525
Htur_3094
PFAM: ribonuclease II; KEGG: tcx:Tcr_1490 ribonuclease R.
  
 0.492
Htur_3202
KEGG: hypothetical protein LOC100032858.
       0.452
Htur_2122
PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; KEGG: dps:DP2463 A/G-specific adenine glycosylase.
 
   
 0.448
Htur_2189
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pca:Pcar_1388 haloacid dehalogenase.
 
 
 0.440
Htur_0024
Sarcosine oxidase; PFAM: FAD dependent oxidoreductase; KEGG: hypothetical protein.
 
 
 0.417
Htur_2905
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: hypothetical protein; K00101 L-lactate dehydrogenase (cytochrome).
  
 
 0.411
Your Current Organism:
Haloterrigena turkmenica
NCBI taxonomy Id: 543526
Other names: H. turkmenica DSM 5511, Haloterrigena turkmenica ATCC 51198, Haloterrigena turkmenica DSM 5511, Haloterrigena turkmenica str. DSM 5511, Haloterrigena turkmenica strain DSM 5511
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