STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Htur_3205PFAM: protein of unknown function DUF6 transmembrane; KEGG: pap:PSPA7_6234 hypothetical protein. (139 aa)    
Predicted Functional Partners:
Htur_3204
PFAM: protein of unknown function DUF6 transmembrane; KEGG: pfo:Pfl01_5645 hypothetical protein.
      
0.785
Htur_3203
PFAM: NUDIX hydrolase; KEGG: dat:HRM2_01950 MutT family protein, putative 78-dihydro-8-oxoguanine triphosphatase (8-oxo-dGTPase).
       0.526
Your Current Organism:
Haloterrigena turkmenica
NCBI taxonomy Id: 543526
Other names: H. turkmenica DSM 5511, Haloterrigena turkmenica ATCC 51198, Haloterrigena turkmenica DSM 5511, Haloterrigena turkmenica str. DSM 5511, Haloterrigena turkmenica strain DSM 5511
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.