| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Htur_3206 | Htur_3207 | Htur_3206 | Htur_3207 | PFAM: UvrD/REP helicase; KEGG: scl:sce7600 ATP-dependent DNA helicase. | Hypothetical protein. | 0.789 |
| Htur_3206 | Htur_3208 | Htur_3206 | Htur_3208 | PFAM: UvrD/REP helicase; KEGG: scl:sce7600 ATP-dependent DNA helicase. | KEGG: spq:SPAB_01122 hypothetical protein. | 0.824 |
| Htur_3206 | fen | Htur_3206 | Htur_1081 | PFAM: UvrD/REP helicase; KEGG: scl:sce7600 ATP-dependent DNA helicase. | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | 0.558 |
| Htur_3206 | ligA | Htur_3206 | Htur_3645 | PFAM: UvrD/REP helicase; KEGG: scl:sce7600 ATP-dependent DNA helicase. | DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.699 |
| Htur_3206 | mutL | Htur_3206 | Htur_3218 | PFAM: UvrD/REP helicase; KEGG: scl:sce7600 ATP-dependent DNA helicase. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.644 |
| Htur_3206 | pcn | Htur_3206 | Htur_0162 | PFAM: UvrD/REP helicase; KEGG: scl:sce7600 ATP-dependent DNA helicase. | Proliferating cell nuclear antigen, PCNA; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. | 0.718 |
| Htur_3206 | radA | Htur_3206 | Htur_0211 | PFAM: UvrD/REP helicase; KEGG: scl:sce7600 ATP-dependent DNA helicase. | DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. | 0.557 |
| Htur_3206 | topA | Htur_3206 | Htur_1458 | PFAM: UvrD/REP helicase; KEGG: scl:sce7600 ATP-dependent DNA helicase. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.690 |
| Htur_3206 | uvrA | Htur_3206 | Htur_3091 | PFAM: UvrD/REP helicase; KEGG: scl:sce7600 ATP-dependent DNA helicase. | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.525 |
| Htur_3206 | uvrC | Htur_3206 | Htur_3639 | PFAM: UvrD/REP helicase; KEGG: scl:sce7600 ATP-dependent DNA helicase. | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.760 |
| Htur_3207 | Htur_3206 | Htur_3207 | Htur_3206 | Hypothetical protein. | PFAM: UvrD/REP helicase; KEGG: scl:sce7600 ATP-dependent DNA helicase. | 0.789 |
| Htur_3207 | Htur_3208 | Htur_3207 | Htur_3208 | Hypothetical protein. | KEGG: spq:SPAB_01122 hypothetical protein. | 0.786 |
| Htur_3208 | Htur_3206 | Htur_3208 | Htur_3206 | KEGG: spq:SPAB_01122 hypothetical protein. | PFAM: UvrD/REP helicase; KEGG: scl:sce7600 ATP-dependent DNA helicase. | 0.824 |
| Htur_3208 | Htur_3207 | Htur_3208 | Htur_3207 | KEGG: spq:SPAB_01122 hypothetical protein. | Hypothetical protein. | 0.786 |
| Htur_3208 | fen | Htur_3208 | Htur_1081 | KEGG: spq:SPAB_01122 hypothetical protein. | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | 0.558 |
| Htur_3208 | ligA | Htur_3208 | Htur_3645 | KEGG: spq:SPAB_01122 hypothetical protein. | DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.617 |
| Htur_3208 | mutL | Htur_3208 | Htur_3218 | KEGG: spq:SPAB_01122 hypothetical protein. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.644 |
| Htur_3208 | pcn | Htur_3208 | Htur_0162 | KEGG: spq:SPAB_01122 hypothetical protein. | Proliferating cell nuclear antigen, PCNA; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. | 0.718 |
| Htur_3208 | radA | Htur_3208 | Htur_0211 | KEGG: spq:SPAB_01122 hypothetical protein. | DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. | 0.557 |
| Htur_3208 | topA | Htur_3208 | Htur_1458 | KEGG: spq:SPAB_01122 hypothetical protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.643 |