STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Htur_3209Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: nmu:Nmul_A1198 CBS. (136 aa)    
Predicted Functional Partners:
Htur_3773
Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: tbd:Tbd_1388 hypothetical protein.
  
     0.651
Htur_3669
Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: tbd:Tbd_1388 hypothetical protein.
  
     0.569
Htur_3206
PFAM: UvrD/REP helicase; KEGG: scl:sce7600 ATP-dependent DNA helicase.
       0.527
Htur_3207
Hypothetical protein.
       0.511
Htur_3208
KEGG: spq:SPAB_01122 hypothetical protein.
       0.503
Htur_1599
PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: dma:DMR_13800 two-component hybrid sensor and regulator.
  
     0.481
Htur_3212
PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; KEGG: bmj:BMULJ_03460 mercuric reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
   0.437
guaAB
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
 
 0.417
Htur_3778
KEGG: gsu:GSU2226 GTP-binding protein Era; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; SMART: AAA ATPase.
  
 0.415
Your Current Organism:
Haloterrigena turkmenica
NCBI taxonomy Id: 543526
Other names: H. turkmenica DSM 5511, Haloterrigena turkmenica ATCC 51198, Haloterrigena turkmenica DSM 5511, Haloterrigena turkmenica str. DSM 5511, Haloterrigena turkmenica strain DSM 5511
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