STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000721705_00671Unannotated protein. (1584 aa)    
Predicted Functional Partners:
GCA_000721705_08242
Unannotated protein.
  
    0.700
GCA_000721705_02781
Unannotated protein.
  
 
  0.635
GCA_000721705_01080
Unannotated protein.
    
 0.617
GCA_000721705_00669
Unannotated protein.
  
    0.556
GCA_000721705_00670
Unannotated protein.
       0.556
GCA_000721705_09790
Unannotated protein.
  
 
  0.526
GCA_000721705_07838
Unannotated protein.
  
 
 0.525
GCA_000721705_00672
Unannotated protein.
       0.522
GCA_000721705_07737
Unannotated protein.
  
  
 0.511
GCA_000721705_09675
Unannotated protein.
  
    0.503
Your Current Organism:
Actinoplanes subtropicus
NCBI taxonomy Id: 543632
Other names: A. subtropicus, Actinoplanes sp. RP-AC33, DSM 45194, NRRL B-24665, strain RP-AC33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.