STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000721705_04650Unannotated protein. (319 aa)    
Predicted Functional Partners:
GCA_000721705_05412
Unannotated protein.
  
 
 0.844
GCA_000721705_06927
Unannotated protein.
    
  0.785
GCA_000721705_05411
Unannotated protein.
  
 
 0.739
GCA_000721705_07597
Unannotated protein.
    
  0.676
GCA_000721705_03796
Unannotated protein.
    
  0.620
GCA_000721705_04648
Unannotated protein.
  
 
  0.582
GCA_000721705_04683
Unannotated protein.
  
 
  0.578
GCA_000721705_04651
Unannotated protein.
       0.550
GCA_000721705_04649
Unannotated protein.
       0.510
GCA_000721705_09739
Unannotated protein.
    
  0.500
Your Current Organism:
Actinoplanes subtropicus
NCBI taxonomy Id: 543632
Other names: A. subtropicus, Actinoplanes sp. RP-AC33, DSM 45194, NRRL B-24665, strain RP-AC33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.