STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000721705_08195Unannotated protein. (585 aa)    
Predicted Functional Partners:
GCA_000721705_08194
Unannotated protein.
    
  0.824
GCA_000721705_02990
Unannotated protein.
 
  
 0.780
GCA_000721705_03926
Unannotated protein.
  
  
  0.764
GCA_000721705_08191
Unannotated protein.
       0.757
GCA_000721705_08192
Unannotated protein.
       0.757
GCA_000721705_08193
Unannotated protein.
       0.757
GCA_000721705_03823
Unannotated protein.
 
  
  0.748
GCA_000721705_08328
Unannotated protein.
 
  
  0.741
GCA_000721705_04251
Unannotated protein.
  
     0.720
GCA_000721705_08417
Unannotated protein.
 
  
  0.666
Your Current Organism:
Actinoplanes subtropicus
NCBI taxonomy Id: 543632
Other names: A. subtropicus, Actinoplanes sp. RP-AC33, DSM 45194, NRRL B-24665, strain RP-AC33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.