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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16679.1KEGG: pol:Bpro_0028 NADPH-dependent FMN reductase. (363 aa)    
Predicted Functional Partners:
ACS22515.1
TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF11; KEGG: pna:Pnap_0406 hypothetical protein.
  
     0.659
ACS21667.1
PFAM: Ferritin Dps family protein; KEGG: pna:Pnap_0325 ferritin, Dps family protein; Belongs to the Dps family.
  
  
 0.637
ACS22514.1
TIGRFAM: conserved repeat domain protein; KEGG: pna:Pnap_0407 hypothetical protein.
  
     0.636
ACS22516.1
TIGRFAM: conserved repeat domain protein; KEGG: pna:Pnap_0405 hypothetical protein.
  
     0.618
ACS16680.1
PFAM: Pirin domain protein; KEGG: rso:RSc0541 pirin-like protein; Belongs to the pirin family.
       0.578
ACS16682.1
PFAM: glycosyl transferase family 51; KEGG: pna:Pnap_0025 glycosyl transferase family protein.
 
     0.549
ACS17164.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.510
ACS18655.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.510
ACS18360.1
PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; KEGG: lch:Lcho_0199 putative serine protein kinase, PrkA.
   
    0.509
ACS16685.1
PFAM: Vault protein inter-alpha-trypsin domain protein; von Willebrand factor type A; SMART: von Willebrand factor type A; Vault protein inter-alpha-trypsin, metazoa; KEGG: pna:Pnap_0028 vault protein inter-alpha-trypsin subunit.
 
     0.506
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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