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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16691.1KEGG: dia:Dtpsy_0973 hypothetical protein. (319 aa)    
Predicted Functional Partners:
ACS18052.1
KEGG: pol:Bpro_3636 putative transmembrane protein.
  
     0.565
ACS17556.1
PFAM: protein of unknown function DUF945; KEGG: dac:Daci_4282 hypothetical protein.
  
     0.515
ACS18069.1
KEGG: aav:Aave_1218 putative transmembrane protein.
  
     0.494
ACS18284.1
KEGG: rfr:Rfer_2980 putative signal peptide protein.
  
     0.474
ACS21788.1
PFAM: beta-lactamase domain protein; KEGG: pol:Bpro_4676 cyclic-AMP phosphodiesterase.
  
     0.448
ACS20702.1
KEGG: pna:Pnap_0959 putative lipoprotein.
  
     0.416
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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