close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16703.1PFAM: protein of unknown function DUF1446; KEGG: cti:RALTA_B0801 conserved hypothetical protein; DUF1446. (616 aa)    
Predicted Functional Partners:
ACS16952.1
KEGG: pol:Bpro_2997 homogentisate 1,2-dioxygenase; TIGRFAM: homogentisate 1,2-dioxygenase; PFAM: homogentisate 12-dioxygenase.
 
 
 0.859
ACS21397.1
PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; carboxyl transferase; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: dac:Daci_1073 carbamoyl-phosphate synthase L chain ATP-binding.
  
  
 0.854
ACS16704.1
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cti:RALTA_B0800 putative enoyl-CoA hydratase/isomerase.
  
  
 0.798
ACS16702.1
PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pol:Bpro_0063 NADH:flavin oxidoreductase/NADH oxidase.
  
  
 0.569
ACS16701.1
PFAM: Endoribonuclease L-PSP; KEGG: bpy:Bphyt_7184 endoribonuclease L-PSP.
  
   0.568
ACS16990.1
Methylcrotonoyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: rpe:RPE_2254 propionyl-CoA carboxylase.
 
  
 0.527
ACS16705.1
PFAM: Glutathione S-transferase domain; KEGG: aav:Aave_0048 glutathione S-transferase domain-containing protein; Belongs to the GST superfamily.
  
  
 0.506
ACS16987.1
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: vei:Veis_1896 acyl-CoA dehydrogenase domain-containing protein.
 
  
 0.506
ACS18762.1
methylmalonyl-CoA mutase, large subunit; KEGG: pol:Bpro_2161 methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein.
     
 0.503
ACS18132.1
PFAM: transcriptional coactivator/pterin dehydratase; KEGG: dia:Dtpsy_2696 transcriptional coactivator/pterin dehydratase.
  
  
 0.463
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.