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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16711.1PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rfr:Rfer_0051 cobyrinic acid a,c-diamide synthase. (304 aa)    
Predicted Functional Partners:
ACS16713.1
KEGG: dia:Dtpsy_0050 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the ParB family.
 
 
 0.980
ACS22400.1
parB-like partition protein; KEGG: bbt:BBta_p0015 putative ParB-like (KorB) partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KorB domain protein; SMART: ParB domain protein nuclease; Belongs to the ParB family.
 
 
 0.902
ACS16710.1
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pol:Bpro_0075 lysine exporter protein (LysE/YggA).
  
    0.814
ACS16712.1
PFAM: protein of unknown function DUF1234; KEGG: ajs:Ajs_0030 hypothetical protein.
       0.813
ACS22673.1
KEGG: bph:Bphy_7203 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the ParB family.
 
 
 0.787
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.744
ACS17936.1
PFAM: cell divisionFtsK/SpoIIIE; KEGG: aav:Aave_3426 DNA translocase FtsK.
  
  
 0.723
ACS22488.1
KEGG: pna:Pnap_4692 ParB-like partition proteins; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the ParB family.
 
 
 0.705
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.648
ACS19173.1
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: pna:Pnap_2368 TonB-dependent receptor, plug.
    
 
 0.608
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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