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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16722.1KEGG: mms:mma_0343 hypothetical protein. (143 aa)    
Predicted Functional Partners:
ACS20702.1
KEGG: pna:Pnap_0959 putative lipoprotein.
 
    0.517
ACS16721.1
Hypothetical protein.
       0.508
ACS16720.1
PFAM: lipolytic protein G-D-S-L family; KEGG: nmc:NMC1592 putative lipase.
       0.495
ACS21714.1
KEGG: dac:Daci_0832 putative lipoprotein transmembrane.
 
    0.461
ACS21874.1
PFAM: Barstar (barnase inhibitor); KEGG: dia:Dtpsy_3467 barstar (barnase inhibitor).
  
     0.456
ACS18495.1
KEGG: dac:Daci_1239 hypothetical protein.
  
     0.444
ACS20490.1
PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: reu:Reut_B5044 rhodanese-like protein.
  
     0.433
ACS20489.1
PFAM: cysteine dioxygenase type I; KEGG: rme:Rmet_2216 cysteine dioxygenase type I.
  
     0.402
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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