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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16734.1PFAM: AMP-dependent synthetase and ligase; KEGG: dar:Daro_3240 feruloyl-CoA synthase. (605 aa)    
Predicted Functional Partners:
ACS16735.1
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_C0922 putative 3-hydroxyacyl-CoA dehydrogenase.
  
  
 0.823
ACS16736.1
PFAM: conserved hypothetical protein; KEGG: pna:Pnap_0604 hypothetical protein.
       0.778
ACS22347.1
PFAM: manganese and iron superoxide dismutase; SMART: Rhodanese domain protein; KEGG: pol:Bpro_2502 manganese and iron superoxide dismutase.
  
 
 0.753
ACS21012.1
PFAM: amidohydrolase 2; KEGG: dac:Daci_4537 amidohydrolase 2.
 
  
 0.743
ACS21013.1
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pna:Pnap_0605 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.730
ACS19802.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta-ketoacyl synthase; aminotransferase class-III; Acyl transferase; phosphopantetheine-binding; KEGG: bph:Bphy_1672 amino acid adenylation domain-containing protein.
  
 0.716
ACS16737.1
PFAM: protein of unknown function DUF849; KEGG: bxe:Bxe_C0921 3-keto-5-aminohexanoate cleavage enzyme.
       0.700
ACS16756.1
TIGRFAM: benzoyl-CoA-dihydrodiol lyase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dac:Daci_0074 enoyl-CoA hydratase.
 
 
 0.699
ACS20361.1
PFAM: KR domain protein; Beta-ketoacyl synthase; Acyl transferase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: aav:Aave_3732 beta-ketoacyl synthase.
  
 0.637
ACS20686.1
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: pna:Pnap_0825 NADH dehydrogenase (quinone).
    
 
 0.633
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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