Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ACS16764.1PFAM: cyclase family protein; KEGG: vei:Veis_0387 cyclase family protein. (268 aa)    
Predicted Functional Partners:
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
  
 0.824
ACS16763.1
Fumarylacetoacetase; KEGG: bpy:Bphyt_2380 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: Domain of unknown function DUF1969; fumarylacetoacetate (FAA) hydrolase.
       0.729
ACS16766.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0385 binding-protein-dependent transport systems inner membrane component.
       0.713
ACS16769.1
PFAM: regulatory protein TetR; KEGG: vei:Veis_0382 TetR family transcriptional regulator.
 
     0.694
ACS16765.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0386 binding-protein-dependent transport systems inner membrane component.
       0.673
ACS16768.1
PFAM: NMT1/THI5 like domain protein; KEGG: vei:Veis_0383 NlpA lipoprotein.
       0.664
ACS16767.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_0384 ABC transporter related.
       0.663
ACS16737.1
PFAM: protein of unknown function DUF849; KEGG: bxe:Bxe_C0921 3-keto-5-aminohexanoate cleavage enzyme.
  
  
 0.561
ACS16791.1
PFAM: protein of unknown function DUF849; KEGG: reu:Reut_B5853 3-keto-5-aminohexanoate cleavage enzyme.
  
  
 0.561
ACS16770.1
TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_0120 acetyl-CoA synthetase.
  
    0.470
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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