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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16767.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_0384 ABC transporter related. (260 aa)    
Predicted Functional Partners:
ACS16766.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0385 binding-protein-dependent transport systems inner membrane component.
 
  
 0.962
ACS16765.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0386 binding-protein-dependent transport systems inner membrane component.
  
 0.961
ACS16768.1
PFAM: NMT1/THI5 like domain protein; KEGG: vei:Veis_0383 NlpA lipoprotein.
 
  
 0.935
ACS18548.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_1369 ABC transporter membrane protein.
  
 0.810
ACS22111.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB2457 permease component of ABC transporter.
 
  
 0.803
ACS20140.1
TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_2376 nitrate ABC transporter, inner membrane subunit.
 
  
 0.794
ACS18559.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_B2062 nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein.
 
  
 0.774
ACS16769.1
PFAM: regulatory protein TetR; KEGG: vei:Veis_0382 TetR family transcriptional regulator.
       0.773
ACS16818.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1046 binding-protein-dependent transport systems inner membrane component.
 
  
 0.760
ACS18558.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A2158 sulfate ester ABC transporter inner membrane protein.
 
  
 0.760
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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