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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16769.1PFAM: regulatory protein TetR; KEGG: vei:Veis_0382 TetR family transcriptional regulator. (242 aa)    
Predicted Functional Partners:
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
    0.847
ACS21772.1
PFAM: YaeQ family protein; KEGG: rfr:Rfer_4048 YaeQ.
   
    0.844
ACS16765.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0386 binding-protein-dependent transport systems inner membrane component.
       0.773
ACS16766.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0385 binding-protein-dependent transport systems inner membrane component.
       0.773
ACS16767.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_0384 ABC transporter related.
       0.773
ACS16768.1
PFAM: NMT1/THI5 like domain protein; KEGG: vei:Veis_0383 NlpA lipoprotein.
       0.773
ACS16764.1
PFAM: cyclase family protein; KEGG: vei:Veis_0387 cyclase family protein.
 
     0.695
ACS16763.1
Fumarylacetoacetase; KEGG: bpy:Bphyt_2380 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: Domain of unknown function DUF1969; fumarylacetoacetate (FAA) hydrolase.
       0.607
ACS18392.1
PFAM: Transcriptional regulator TetR; regulatory protein TetR; KEGG: pfl:PFL_5951 TetR family transcriptional regulator.
  
    0.587
ACS16770.1
TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_0120 acetyl-CoA synthetase.
       0.545
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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