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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16785.1KEGG: dac:Daci_4222 hypothetical protein. (276 aa)    
Predicted Functional Partners:
ACS16786.1
PFAM: Uracil-DNA glycosylase superfamily; KEGG: reh:H16_B1845 uracil-dna glycosylase.
       0.748
ACS17964.1
KEGG: vei:Veis_2009 citrate synthase.
  
 
 0.640
ACS18076.1
KEGG: pna:Pnap_3037 type II citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.640
ACS21428.1
KEGG: dac:Daci_0799 citrate synthase.
  
 
 0.640
ACS22245.1
KEGG: bpt:Bpet2878 citrate synthase.
  
 
 0.640
ACS22342.1
PFAM: Citrate synthase; regulatory protein MerR; KEGG: pna:Pnap_0845 citrate synthase.
  
 
 0.640
ACS17453.1
KEGG: met:M446_1932 MmgE/PrpD family protein.
  
  
 0.619
ACS17962.1
PFAM: MmgE/PrpD family protein; KEGG: ajs:Ajs_0116 MmgE/PrpD family protein.
  
  
 0.619
ACS22711.1
PFAM: MmgE/PrpD family protein; KEGG: dac:Daci_1760 MmgE/PrpD family protein.
  
  
 0.619
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
  
 0.587
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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