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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16789.1PFAM: Cupin 2 conserved barrel domain protein; KEGG: rme:Rmet_1908 cupin 2, conserved barrel. (120 aa)    
Predicted Functional Partners:
ACS16790.1
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: reh:H16_B1796 NADPH:quinone reductase Zn-dependent oxidoreductase.
 
     0.864
ACS16791.1
PFAM: protein of unknown function DUF849; KEGG: reu:Reut_B5853 3-keto-5-aminohexanoate cleavage enzyme.
 
     0.636
ACS16787.1
PFAM: Amidohydrolase 3; KEGG: smt:Smal_2334 amidohydrolase 3.
       0.612
ACS16788.1
PFAM: conserved hypothetical protein; KEGG: vei:Veis_0621 hypothetical protein.
       0.608
ACS16792.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reu:Reut_B5854 NAD-dependent epimerase/dehydratase:short-chain dehydrogenase/reductase SDR.
 
   
 0.558
ACS16835.1
KEGG: cja:CJA_0124 hypothetical protein.
 
     0.536
ACS16920.1
PFAM: O-antigen polymerase; KEGG: har:HEAR0457 hypothetical protein.
 
  
 0.528
ACS18581.1
PFAM: sugar transferase; KEGG: ajs:Ajs_3034 undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.508
ACS17217.1
Hypothetical protein; KEGG: eba:ebA1686 serine/threonine protein kinase.
  
     0.495
ACS22531.1
TIGRFAM: outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; KEGG: dar:Daro_3199 VCBS.
  
     0.492
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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