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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16813.1PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pna:Pnap_0112 ATPase central domain-containing protein. (775 aa)    
Predicted Functional Partners:
ACS16665.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.749
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
   
 0.710
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 0.698
ACS19477.1
KEGG: aav:Aave_3411 DNA-directed DNA polymerase.
   
 0.673
ACS17715.1
PFAM: ABC transporter domain protein; ABC transporter related; SbmABacA family protein; SMART: AAA ATPase; KEGG: rfr:Rfer_0735 ABC transporter-like.
  
  
 0.663
ACS17010.1
PFAM: acyl-coA-binding protein ACBP; KEGG: dia:Dtpsy_0446 acyl-coA-binding protein ACBP.
     
 0.602
ACS18418.1
PFAM: histone deacetylase superfamily; KEGG: pol:Bpro_3087 histone deacetylase superfamily.
   
 0.601
ACS19993.1
PFAM: histone deacetylase superfamily; KEGG: ajs:Ajs_2813 histone deacetylase superfamily protein.
   
 0.601
ACS21297.1
PFAM: histone deacetylase superfamily; KEGG: pol:Bpro_2707 histone deacetylase superfamily.
   
 0.601
ACS21829.1
PFAM: histone deacetylase superfamily; KEGG: pol:Bpro_0416 histone deacetylase superfamily.
   
 0.601
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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