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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16823.1PFAM: regulatory protein IclR; Transcriptional regulator IclR; regulatory protein ArsR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein IclR; KEGG: pol:Bpro_1041 transcriptional regulator, IclR family. (244 aa)    
Predicted Functional Partners:
ACS19787.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: pol:Bpro_3689 transcriptional regulator, IclR family.
  
     0.774
ACS21321.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bpt:Bpet2156 IclR family transcriptional regulator.
  
     0.774
ACS16778.1
PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: reh:H16_B0879 transcriptional regulator, IclR-family.
  
     0.773
ACS20443.1
PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: mpt:Mpe_A3670 IclR family transcriptional regulator.
  
     0.773
ACS21047.1
Transcriptional regulator, IclR family; KEGG: pna:Pnap_0864 beta-ketoadipate pathway transcription regulator; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR.
  
     0.771
ACS22313.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bpy:Bphyt_4108 transcriptional regulator, IclR family.
  
     0.770
ACS19003.1
PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: dia:Dtpsy_1946 transcriptional regulator, IclR family.
  
     0.769
ACS19948.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: dac:Daci_4439 IclR family transcriptional regulator.
  
     0.769
ACS21425.1
PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: dac:Daci_0796 IclR family transcriptional regulator.
  
     0.769
ACS19010.1
KEGG: pol:Bpro_2991 transcriptional regulator, IclR family; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR.
  
     0.767
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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