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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16838.1PFAM: amidohydrolase; KEGG: pol:Bpro_4072 enamidase. (399 aa)    
Predicted Functional Partners:
ACS16841.1
KEGG: pol:Bpro_4068 6-hydroxynicotinate reductase.
 
  
  0.984
ACS16842.1
PFAM: ApbE family lipoprotein; KEGG: pol:Bpro_4067 hypothetical protein.
 
     0.845
ACS16844.1
PFAM: protein of unknown function DUF1185; KEGG: pol:Bpro_4065 protein of unknown function DUF1185.
 
     0.840
ACS16843.1
PFAM: protein of unknown function DUF1185; KEGG: pol:Bpro_4066 protein of unknown function DUF1185.
 
     0.827
ACS16839.1
PFAM: regulatory protein TetR; KEGG: vei:Veis_0851 TetR family transcriptional regulator.
       0.791
ACS22304.1
PFAM: protein of unknown function DUF1185; KEGG: bav:BAV1032 hypothetical protein.
 
     0.781
ACS16840.1
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pna:Pnap_2736 ferredoxin--NADP(+) reductase.
       0.740
ACS16845.1
PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_4064 extracellular ligand-binding receptor.
 
     0.583
ACS16846.1
PFAM: inner-membrane translocator; KEGG: pol:Bpro_4063 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.573
ACS16848.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_4062 ABC transporter related.
 
     0.521
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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