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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16847.1Hypothetical protein. (245 aa)    
Predicted Functional Partners:
ACS16846.1
PFAM: inner-membrane translocator; KEGG: pol:Bpro_4063 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.773
ACS16848.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_4062 ABC transporter related.
       0.773
ACS16849.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_4061 ABC transporter related.
       0.773
ACS16845.1
PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_4064 extracellular ligand-binding receptor.
       0.693
ACS16850.1
Nicotinamidase; PFAM: isochorismatase hydrolase; KEGG: vei:Veis_0861 nicotinamidase.
       0.605
ACS16844.1
PFAM: protein of unknown function DUF1185; KEGG: pol:Bpro_4065 protein of unknown function DUF1185.
       0.511
ACS16851.1
PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_4060 extracellular ligand-binding receptor.
       0.462
ACS16852.1
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: ppf:Pput_1890 2Fe-2S iron-sulfur cluster binding domain-containing protein.
       0.462
ACS16843.1
PFAM: protein of unknown function DUF1185; KEGG: pol:Bpro_4066 protein of unknown function DUF1185.
       0.437
ACS16842.1
PFAM: ApbE family lipoprotein; KEGG: pol:Bpro_4067 hypothetical protein.
       0.405
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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