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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16854.1PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pol:Bpro_0733 hypothetical protein. (395 aa)    
Predicted Functional Partners:
ACS16853.1
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: pol:Bpro_4058 isoquinoline 1-oxidoreductase.
       0.525
ACS22299.1
PFAM: Dimethylmenaquinone methyltransferase; KEGG: vei:Veis_3405 hypothetical protein.
 
     0.511
ACS16855.1
TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein; KEGG: bbr:BB0799 hypothetical protein.
       0.490
ACS17436.1
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: pol:Bpro_3967 altronate dehydratase.
 
   
 0.480
ACS18599.1
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: dac:Daci_2347 galactarate dehydratase.
 
   
 0.479
ACS22599.1
2-dehydro-3-deoxygalactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: bvi:Bcep1808_0593 2-keto-3-deoxygalactonate kinase.
 
     0.422
ACS22125.1
PFAM: dihydrodipicolinate synthetase; KEGG: acr:Acry_0196 dihydrodipicolinate synthetase; Belongs to the DapA family.
 
     0.416
ACS17441.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_3961 short-chain dehydrogenase/reductase SDR.
 
     0.402
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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