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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16873.1TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: bpt:Bpet4105 putative lipoprotein. (156 aa)    
Predicted Functional Partners:
ACS16875.1
TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: OmpA/MotB domain protein; KEGG: bps:BPSS2105 hypothetical protein.
 
  
 0.989
ACS17178.1
TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: OmpA/MotB domain protein; KEGG: bpt:Bpet4103 hypothetical protein.
 
  
 0.980
ACS16874.1
TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: bpt:Bpet4104 hypothetical protein.
 
  
 0.926
ACS17215.1
TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: pae:PA0080 hypothetical protein.
  
  
 
0.914
ACS16877.1
TIGRFAM: type VI secretion-associated protein, BMA_A0400 family; KEGG: bpt:Bpet4101 hypothetical protein.
 
  
 0.907
ACS16876.1
TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: bpt:Bpet4102 hypothetical protein.
 
  
 0.904
ACS16871.1
TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: spe:Spro_3006 FHA domain-containing protein.
 
  
 0.891
ACS16860.1
TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: bbr:BB0804 hypothetical protein.
 
  
 0.872
ACS16856.1
TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: bpt:Bpet4117 hypothetical protein.
 
  
 0.870
ACS17177.1
TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: bpa:BPP0728 hypothetical protein.
 
  
 0.862
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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