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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16906.1KEGG: bbr:BB0736 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family. (486 aa)    
Predicted Functional Partners:
ACS16905.1
KEGG: bpy:Bphyt_5827 3,4-dihydroxyphenylacetate 2,3-dioxygenase; TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B.
 
 
 0.989
ACS16904.1
PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: dac:Daci_0102 5-carboxymethyl-2-hydroxymuconate isomerase.
 
 
 0.985
ACS16908.1
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rpi:Rpic_1960 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit.
 
 
 0.863
ACS16903.1
2-oxo-hepta-3-ene-1,7-dioic acid hydratase; KEGG: bav:BAV1262 2-oxo-hept-3-ene-1,7-dioate hydratase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase.
 
  
 0.856
ACS16907.1
KEGG: rpi:Rpic_1959 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase.
 
 
 0.850
ACS16909.1
KEGG: bmj:BMULJ_04131 MarR family transcriptional regulator; TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
 
   
 0.838
ACS16902.1
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; KEGG: rfr:Rfer_0941 2-dehydro-3-deoxyglucarate aldolase; TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.822
ACS16901.1
PFAM: protein of unknown function DUF1486; KEGG: bcj:BCAM2778 putative exported cyclase.
       0.639
ilvD
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: dac:Daci_2450 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
 
 0.587
ACS16912.1
KEGG: xoo:XOO1635 hypothetical protein.
  
 0.567
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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