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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16910.1KEGG: bxe:Bxe_B1284 hypothetical protein. (130 aa)    
Predicted Functional Partners:
ACS16911.1
TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; KEGG: xop:PXO_05538 rhs repeat family.
       0.581
ACS16912.1
KEGG: xoo:XOO1635 hypothetical protein.
       0.488
ACS16913.1
TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: bxe:Bxe_A4429 rhs element Vgr protein.
       0.488
ACS16905.1
KEGG: bpy:Bphyt_5827 3,4-dihydroxyphenylacetate 2,3-dioxygenase; TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B.
       0.456
ACS16906.1
KEGG: bbr:BB0736 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.456
ACS16907.1
KEGG: rpi:Rpic_1959 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase.
       0.456
ACS16908.1
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rpi:Rpic_1960 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit.
       0.456
ACS16909.1
KEGG: bmj:BMULJ_04131 MarR family transcriptional regulator; TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
       0.456
ACS16903.1
2-oxo-hepta-3-ene-1,7-dioic acid hydratase; KEGG: bav:BAV1262 2-oxo-hept-3-ene-1,7-dioate hydratase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase.
       0.450
ACS16904.1
PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: dac:Daci_0102 5-carboxymethyl-2-hydroxymuconate isomerase.
       0.450
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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