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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16923.1PFAM: monooxygenase FAD-binding; KEGG: har:HEAR2878 halogenase. (568 aa)    
Predicted Functional Partners:
ACS16924.1
KEGG: xca:xccb100_4191 hypothetical protein.
 
   
 0.936
ACS19294.1
KEGG: mpt:Mpe_A1316 acyl carrier protein.
 
    0.783
ACS16921.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: aav:Aave_0274 integral membrane sensor signal transduction histidine kinase.
       0.779
ACS16922.1
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rfr:Rfer_0510 two component transcriptional regulator.
     
 0.774
ACS16925.1
PFAM: Beta-ketoacyl synthase; KEGG: xcb:XC_4087 3-oxoacyl-(acyl carrier protein) synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
   
 0.772
ACS19297.1
KEGG: mpt:Mpe_A1320 hypothetical protein.
 
     0.740
ACS19299.1
KEGG: mpt:Mpe_A1322 hypothetical protein.
 
     0.737
ACS19296.1
PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: mpt:Mpe_A1318 putative CoA ligase (AMP forming).
 
   
 0.730
ACS19991.1
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dac:Daci_2390 electron transfer flavoprotein alpha/beta-subunit.
  
 
 0.722
ACS19907.1
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.687
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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