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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16930.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0834 binding-protein-dependent transport systems inner membrane component. (276 aa)    
Predicted Functional Partners:
ACS16929.1
PFAM: NMT1/THI5 like domain protein; KEGG: vei:Veis_0833 ABC transporter, substrate binding protein.
 
  
 0.964
ACS18557.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_A2157 sulfate ester ABC transporter ATPase.
 
 
 0.963
ACS16931.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_0835 ABC transporter related.
 
  
 0.957
ssuB
ABC transporter related; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.931
ACS18551.1
PFAM: NADPH-dependent FMN reductase; KEGG: aav:Aave_0879 NADPH-dependent FMN reductase.
  
 
  0.836
ACS19600.1
PFAM: NADPH-dependent FMN reductase; KEGG: pna:Pnap_2421 NADPH-dependent FMN reductase.
  
 
  0.836
ACS16928.1
TIGRFAM: allophanate hydrolase; PFAM: Amidase; KEGG: vei:Veis_0832 amidase.
 
     0.827
ACS20459.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_4285 ABC transporter related.
 
  
 0.827
ACS16819.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_1045 ABC transporter related.
 
  
 0.814
ACS18510.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_0618 ABC transporter related.
 
  
 0.811
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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