Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACS16934.1PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A0768 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (353 aa)    
Predicted Functional Partners:
ACS16937.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0765 ABC transporter.
 
  
 0.975
ACS16933.1
PFAM: basic membrane lipoprotein; KEGG: mpt:Mpe_A0769 bmp family protein.
 
  
 0.946
ACS16935.1
PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A0767 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
0.937
ACS19281.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_4429 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.911
ACS19283.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lch:Lcho_3576 ABC transporter-related protein.
 
  
 0.896
ACS20517.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_2135 ABC transporter related.
 
  
 0.894
ACS21452.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: psb:Psyr_1002 ABC transporter.
 
  
 0.893
ACS16936.1
PFAM: isochorismatase hydrolase; KEGG: mpt:Mpe_A0766 isochorismatase family protein.
 
     0.865
ACS21451.1
PFAM: basic membrane lipoprotein; KEGG: bpy:Bphyt_4236 basic membrane lipoprotein.
 
  
 0.833
ACS20496.1
PFAM: basic membrane lipoprotein; KEGG: rfr:Rfer_3296 basic membrane lipoprotein.
 
  
 0.827
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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