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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16958.1KEGG: har:HEAR0765 hypothetical protein. (73 aa)    
Predicted Functional Partners:
ACS16960.1
PFAM: Mammalian cell entry related domain protein; KEGG: dia:Dtpsy_0246 mammalian cell entry related domain protein.
 
     0.693
ACS16959.1
PFAM: protein of unknown function DUF330; KEGG: pol:Bpro_0233 putative lipoprotein.
 
     0.691
ACS16961.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_0231 ABC transporter related.
       0.626
ACS16962.1
PFAM: protein of unknown function DUF140; KEGG: dia:Dtpsy_0244 protein of unknown function DUF140.
       0.626
ACS19040.1
PFAM: regulatory protein TetR; KEGG: mms:mma_0049 TetR family transcriptional regulator.
  
     0.582
ACS17011.1
KEGG: pna:Pnap_3497 hypothetical protein.
  
     0.569
ACS18792.1
PFAM: glutaredoxin; KEGG: aav:Aave_2457 glutaredoxin.
  
     0.491
ACS17013.1
TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; PFAM: poly granule associated family protein; KEGG: pol:Bpro_4024 poly granule associated.
  
     0.481
ACS20056.1
PFAM: 17 kDa surface antigen; KEGG: pol:Bpro_3177 17 kDa surface antigen.
  
     0.422
ACS17001.1
TIGRFAM: polyhydroxyalkanoic acid system protein; KEGG: pna:Pnap_3503 putative polyhydroxyalkanoic acid system protein.
  
     0.400
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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