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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS16969.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0887 binding-protein-dependent transport systems inner membrane component. (264 aa)    
Predicted Functional Partners:
ACS16970.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_0888 binding-protein-dependent transport systems inner membrane component.
  
0.970
ACS16971.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rfr:Rfer_0889 ABC transporter related; Belongs to the ABC transporter superfamily.
 
  
 0.969
ACS21303.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2915 binding-protein-dependent transport systems inner membrane component.
  
 0.968
ACS16965.1
PFAM: extracellular solute-binding protein family 1; KEGG: rfr:Rfer_0883 extracellular solute-binding protein.
 
    0.936
ACS16968.1
KEGG: rfr:Rfer_0886 hypothetical protein.
 
     0.911
ACS20152.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_2471 binding-protein-dependent transport systems inner membrane component.
  
 0.909
ACS16967.1
PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rfr:Rfer_0885 BFD-like (2Fe-2S)-binding protein.
 
     0.877
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
 0.866
ACS16966.1
PFAM: FAD dependent oxidoreductase; KEGG: rfr:Rfer_0884 FAD dependent oxidoreductase.
 
     0.865
ACS21302.1
PFAM: extracellular solute-binding protein family 1; KEGG: pol:Bpro_2914 extracellular solute-binding protein, family 1.
 
  
 0.850
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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