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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17012.1PFAM: regulatory protein TetR; KEGG: rfr:Rfer_3529 TetR family transcriptional regulator. (237 aa)    
Predicted Functional Partners:
ACS17011.1
KEGG: pna:Pnap_3497 hypothetical protein.
 
 
 
 0.955
ACS17013.1
TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; PFAM: poly granule associated family protein; KEGG: pol:Bpro_4024 poly granule associated.
 
     0.879
ACS17010.1
PFAM: acyl-coA-binding protein ACBP; KEGG: dia:Dtpsy_0446 acyl-coA-binding protein ACBP.
 
     0.709
ACS20208.1
KEGG: pna:Pnap_1357 hypothetical protein.
  
     0.638
ACS21780.1
PFAM: O-antigen polymerase; KEGG: pol:Bpro_4672 O-antigen polymerase.
  
     0.613
ACS21711.1
PFAM: branched-chain amino acid transport; KEGG: pol:Bpro_4636 branched-chain amino acid transport.
  
     0.530
ACS17402.1
KEGG: aav:Aave_4509 hypothetical protein.
  
     0.503
ACS19571.1
ZipA FtsZ-binding region; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
   
 0.490
ACS21389.1
KEGG: pol:Bpro_0444 hypothetical protein.
  
   
 0.487
ACS18032.1
PFAM: Rieske [2Fe-2S] domain protein; KEGG: pol:Bpro_3657 Rieske (2Fe-2S) region.
  
     0.480
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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